MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Microbacterium paludicola
19428wA4_P1012
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 127
bases: 3,293,562 bps
CDS: 3,068
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 52
misc RNA:
Total features: 3,124
Total number of protein coding genes annotated/found:
3,068
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 154 pages
Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5044|JADGLL010000091.1
SEQF5044_03033
Genome Viewer
NA
AA
1014/338
1038-25
ISL3 family transposase ISPfr20
SEQF5044|JADGLL010000086.1
SEQF5044_02936
Genome Viewer
NA
AA
1914/638
4-1917
hypothetical protein
SEQF5044|JADGLL010000056.1
SEQF5044_02397
Genome Viewer
NA
AA
2061/687
426-2486
Xylan alpha-(1->2)-glucuronosidase
SEQF5044|JADGLL010000056.1
SEQF5044_02398
Genome Viewer
NA
AA
699/233
3246-2548
hypothetical protein
SEQF5044|JADGLL010000056.1
SEQF5044_02399
Genome Viewer
NA
AA
1542/514
4883-3342
Beta-xylosidase
SEQF5044|JADGLL010000056.1
SEQF5044_02400
Genome Viewer
NA
AA
1668/556
6684-5017
hypothetical protein
SEQF5044|JADGLL010000056.1
SEQF5044_02401
Genome Viewer
NA
AA
999/333
7762-6764
Lactose transport system permease protein LacG
SEQF5044|JADGLL010000056.1
SEQF5044_02402
Genome Viewer
NA
AA
975/325
8730-7756
putative multiple-sugar transport system permease YteP
SEQF5044|JADGLL010000056.1
SEQF5044_02403
Genome Viewer
NA
AA
1611/537
8925-10535
hypothetical protein
SEQF5044|JADGLL010000056.1
SEQF5044_02404
Genome Viewer
NA
AA
1014/338
10643-11656
HTH-type transcriptional repressor CytR
SEQF5044|JADGLL010000056.1
SEQF5044_02405
Genome Viewer
NA
AA
1425/475
13103-11679
hypothetical protein
SEQF5044|JADGLL010000056.1
SEQF5044_02406
Genome Viewer
NA
AA
1008/336
14286-13279
hypothetical protein
SEQF5044|JADGLL010000037.1
SEQF5044_01720
Genome Viewer
NA
AA
225/75
607-383
hypothetical protein
SEQF5044|JADGLL010000037.1
SEQF5044_01721
Genome Viewer
NA
AA
1674/558
2277-604
putative propionyl-CoA carboxylase beta chain 5
SEQF5044|JADGLL010000037.1
SEQF5044_01722
Genome Viewer
NA
AA
741/247
2382-3122
Bifunctional ligase/repressor BirA
SEQF5044|JADGLL010000037.1
SEQF5044_01723
Genome Viewer
NA
AA
543/181
3191-3733
hypothetical protein
SEQF5044|JADGLL010000037.1
SEQF5044_01724
Genome Viewer
NA
AA
1119/373
3789-4907
N5-carboxyaminoimidazole ribonucleotide synthase
SEQF5044|JADGLL010000037.1
SEQF5044_01725
Genome Viewer
NA
AA
507/169
5023-5529
N5-carboxyaminoimidazole ribonucleotide mutase
SEQF5044|JADGLL010000037.1
SEQF5044_01726
Genome Viewer
NA
AA
1473/491
5558-7030
Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU
SEQF5044|JADGLL010000037.1
SEQF5044_01727
Genome Viewer
NA
AA
1098/366
7083-8180
D-inositol-3-phosphate glycosyltransferase
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 154 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
